Michael,
Since no-one else has responded to your query I will try to address it but I do not have a complete answer. I am not a well operations engineer, but I have read procedures, like you mention, but I cannot unfortunately remember the details.
Some wellheads have facilities for injection of MEG or methanol into the top of the tree beween the upper master valve and the wing valve. The purpose can be to avoid hydrates when the well is started, but this connection could also be used to pressurise above the upper master and balance across it. I don't know if this is necessary though. Another possibility is when you pump into the wellhead to pressure balance the SCSSV, you open the upper master valve and so the balancing pressure exists through the well and tree up to the wing valve. Then close the upper master again before opening the SCSSV. The well fluids are then held by the upper master valve, as they should be, until production is started.
The choke valve is usually mounted flange to flange with the wing valve (I think?) so there is no need to balance across the wing valve between the wing and the choke. The choke valve is designed to take a pressure drop so it can be opened against the full upstream pressure without balancing. The production routing valve, downstream of the choke, would be opened before opening the choke. so both sides of it are not pressurised.
However I do not have the right background to be confident that my description is the right way, and I am ready to be put right by others on any of these points.
Paul